主要论著
1.ZhiyingLi, Yingli Chen*,Yuanyuan Zhao,andQianzhong Li*. The Methylation and Expression of LINC00511, an Important Angiogenesis-Related lncRNA in Stomach Adenocarcinoma. International Journal of Molecular Sciences. 2025, 26(5),2132
2.Zhiyu Fan,Yingli Chen*,Dongsheng Yan, andQianzhong Li.Effects of Differentially Methylated CpG Sites in Enhancer and Promoter Regions on the Chromatin Structures of Target LncRNAs in Breast Cancer. International Journal of Molecular Sciences,2024, 25(20), 11048
3.Shuhan Liu,Yingli Chen*, Qianzhong Li, Zhiyu Fan, Menglan Li and Pengyu Du. A prognostic model for acute myeloid leukemia based on ferroptosis-related lncRNA and immune infiltration analysis.Biophysics Reports,2024, 10(6): 377-387.
4.Pengyu Du, Yingli Chen*, Qianzhong Li*, Zhimin Gai, Hui Bai, Luqiang Zhang, Yuxian Liu, Yanni Cao, Yuanyuan Zhai and Wen Jin.CancerMHL: the database of integrating key DNA methylation, histone modifications and lncRNAs in cancer.Database-The Journal of Biological Databases and Curation. 2024, baae029
5.Si-Le Hu, Ying-Li Chen, Lu-Qiang Zhang, Hui Bai, Jia-Hong YangandQian-Zhong Li*.LncSTPred: A prediction model of lncRNA subcellular localization and decipherment of the biological determinants influencing localization.Frontiers Molecular Biosciences,2024,11:1452142.
6.Dongsheng Yan, Zhiyu Fan, Qianzhong Li*,andYingli Chen. PPIA-coExp: Discovering Context-Specific Biomarkers Based on Protein-Protein Interactions, Co-Expression Networks, and Expression Data. International Journal of Molecular Sciences, 2024, 25(23), 12608
7.Yuan-Yuan Zhai, Qian-Zhong Li*, Ying-Li Chen, Lu-Qiang Zhang. Identification of Key Histone Modifications and Hub Genes for Colorectal Cancer Metastasis. Current Bioinformatics,2022,17(2): 206-216.
8.Yingli Chen*, Donghua Guo, Qianzhong Li*. An energy model for recognizing the prokaryotic promoters based on molecular structure. Genomics. 2020, 112(2): 2072-2079.
9.Yong-Chun Zuo, Yuan Li, Ying-Li Chen, Guang-Peng Li, Zhen-He Yan, Lei Yang.PseKRAAC: A flexible web server for generating pseudo K-tuple reduced amino acids composition.Bioinformatics. 2017, 33 (1): 122-124.
10.Ying-Li Chen, Qian-Zhong Li and Liqing Zhang, Using increment of diversity to predict mitochondrial proteins of malaria parasite: integrating pseudo amino acid composition and structural alphabet. Amino Acids 2012, 42(4): 1309-1316.
11.Ying-Li Chen and Qian-Zhong Li. Prediction of apoptosis protein subcellular location using improved hybrid approach and pseudo amino acid composition, J. Theor.Biol. 2007, 248(2):377-381.
12.Ying-Li Chen and Qian-Zhong Li. Prediction of the subcellular location of apoptosis proteins, J. Theor.Biol. 2007, 245(4): 775-783.
13.Hao Lin, Hao Wang, Hui Ding, Ying-li Chen and Qian-Zhong Li, Prediction of subcellular localization of apoptosis protein using chou’s pseudo amino acid composition. Acta Biotheoretica. 2009, 57(3):321-330.
14.Yingli Chen*, Jintao Zhao. Prediction of the anti-apoptosis and pro-apoptosis proteins based on domain and motif information. European Biophysics Journal with Biophysics Letters. 2017, 46(1): S211.
15.YuanYuan Zhai, YingLi Chen*, Yue Jiang, QianZhong Li. Weighted Gene Co-expression Network Analysis of Gene Modules for Lung Adenocarcinoma. The 2018 5th International Conference on Systems and Informatics (ICSAI 2018), 473-477.
16.ZhenHe Yan, YingLi Chen* and JinTao Zhao. Using improved k-nearest neighbor method to identify anti- and pro-apoptosis proteins. 2015 8th International Conference on BioMedical Engineering and Informatics. In Proc. BMEI, 2015, p554-559.
17.Ying-Li Chen, Qian-Zhong Li and Liqing Zhang, Prediction of mitochondrial proteins of malaria parasite using improved hybrid method and reduced amino acid alphabet. In Proc. BMEI, 2011, p1592-1596.
